PlastLibrary
BufferedSequenceDatabase.hpp File Reference

Sequence database in memory. More...

#include <database/api/ISequenceDatabase.hpp>
#include <database/api/ISequenceCache.hpp>
#include <database/api/ISequenceBuilder.hpp>
#include <database/impl/AbstractSequenceIterator.hpp>
#include <misc/api/macros.hpp>
#include <vector>
#include <string>
#include <stdio.h>
Include dependency graph for BufferedSequenceDatabase.hpp:

Classes

class  database::impl::BufferedSequenceDatabase
 ISequenceDatabase implementation with memory cache. More...
 
class  database::impl::BufferedSequenceDatabase::BufferedSequenceIterator
 Sequence iterator that uses information of cache. More...
 
class  database::impl::BufferedSequenceBuilder
 SequenceBuilder that builds memory cache. More...
 
class  database::impl::BufferedSegmentSequenceBuilder
 Sequence building with sequence filtering out. More...
 

Namespaces

 database
 Definition of concepts related to genomic databases.
 
 database::impl
 Implementation of concepts related to genomic databases.
 

Detailed Description

Sequence database in memory.

Date
07/11/2011
Author
edrezen